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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs60928432 chr19:43563648 A/G 0.000237 489 15.3 18.93 10.08 KM Plot
THCA rs60946184 chr3:127644213 C/T 0 490 16.3 14.97 6.03 KM Plot
THCA rs60965213 chr13:24886604 A/G 0.000126 485 14.97 18.5 17.53 KM Plot
THCA rs60983572 chr16:15157916 T/C 0.000137 489 16.65 13.9 14.9 KM Plot
THCA rs61034305 chr4:108720179 C/T 0.000294 487 15.48 16.8 13.33 KM Plot
THCA rs6107637 chr20:5485570 A/G 6.12E-5 472 16.3 14.78 9.73 KM Plot
THCA rs6107638 chr20:5485604 A/G 6.12E-5 472 16.3 14.78 9.73 KM Plot
THCA rs6107639 chr20:5485627 A/G 6.12E-5 471 16.33 14.78 9.73 KM Plot
THCA rs61120766 chr10:104833922 A/G 5.02E-9 490 15.23 17.68 32.1 KM Plot
THCA rs61133726 chr6:87172992 A/G 4.43E-14 481 14.93 17.47 21.03 KM Plot
THCA rs61144367 chr7:76411846 T/C 1.75E-8 485 15.32 16.95 15.67 KM Plot
THCA rs61161983 chr19:34410407 A/G 8.1E-6 478 15.7 15.83 17.38 KM Plot
THCA rs61206940 chr8:144565421 C/T 3.04E-9 479 16.67 14.77 12.67 KM Plot
THCA rs61225773 chr19:43565906 A/G 0.000237 488 15.32 18.93 10.08 KM Plot
THCA rs61235336 chr9:15852779 AT/A 1.61E-5 490 6.22 15.97 15.9 KM Plot